Draft genome and sequence variant data of the oomycete Pythium insidiosum strain Pi45 from the phylogenetically-distinct Clade-III
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Author list: Kittichotirat W., Patumcharoenpol P., Rujirawat T., Lohnoo T., Yingyong W., Krajaejun T.
Publisher: Elsevier
Publication year: 2017
Journal: Data in Brief (2352-3409)
Volume number: 15
Start page: 896
End page: 900
Number of pages: 5
ISSN: 2352-3409
eISSN: 2352-3409
Languages: English-Great Britain (EN-GB)
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Abstract
Pythium insidiosum is a unique oomycete microorganism, capable of infecting humans and animals. The organism can be phylogenetically categorized into three distinct clades: Clade-I (strains from the Americas); Clade-II (strains from Asia and Australia), and Clade–III (strains from Thailand and the United States). Two draft genomes of the P. insidiosum Clade-I strain CDC-B5653 and Clade-II strain Pi-S are available in the public domain. The genome of P. insidiosum from the distinct Clade-III, which is distantly-related to the other two clades, is lacking. Here, we report the draft genome sequence of the P. insidiosum strain Pi45 (also known as MCC13; isolated from a Thai patient with pythiosis; accession numbers BCFM01000001-BCFM01017277) as a representative strain of the phylogenetically-distinct Clade-III. We also report a genome-scale data set of sequence variants (i.e., SNPs and INDELs) found in P. insidiosum (accessible online at the Mendeley database: http://dx.doi.org/10.17632/r75799jy6c.1). © 2017 The Authors
Keywords
Draft genome, Sequence variant
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